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University of Northampton, School of Health, Park Campus, Boughton Green Road, Northampton NN2 7AL, UK
Correspondence
Katie Fisher
Katie.fisher{at}northampton.ac.uk
| ABSTRACT |
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| Introduction |
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In 2005 there were 7066 reported cases of bacteraemia caused by Enterococcus species in the UK, an 8 % increase from 2004, with the Health Protection Agency (2007)
stating that an increase in a bacteraemia causing pathogen like this has not been observed for some time. Twenty-eight per cent of all cases were antibiotic resistant (Health Protection Agency, 2007
). The risk of death from vancomycin-resistant enterococci (VRE) is 75 %, compared with 45 % for those infected with a susceptible strain (Bearman & Wenzel, 2005
). These figures are mirrored in the USA. Over a 15 year period there was a 20-fold increase in VRE associated with nosocomial infections reported to CDC's National Nosocomial Infections Surveillance (NNIS) (National Nosocomial Infections Surveillance, 2004
).
This dramatic increase in antibiotic resistance of Enterococcus species worldwide highlights the need for a greater understanding of this genus, including its ecology, epidemiology and virulence.
| Taxonomy |
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In 1984, through the use of DNA hybridization and 16S rRNA sequencing, it was established that the species Streptococcus faecium and Streptococcus faecalis were sufficiently distinct from the other streptococci to be designated another genus: Enterococcus (Foulquie Moreno et al., 2006
). This means that the D group antigen is found in both streptococci and enterococci. Nine species were transferred from the Streptococcus groups and now Enterococcus includes 28 species (Foulquie Moreno et al., 2006
). The molecular data that were collected using 16S rRNA sequencing of Streptococcus enabled the construction of an 16S rRNA-dendrogram showing the relationship between Streptococcus, Enterococcus and Lactococcus species (Fig. 1
). This method also allowed the grouping of Enterococcus species. The Enterococcus faecalis species group includes E. faecalis, Enterococcus haemoperoxidus and Enterococcus moraviensis whilst the Enterococcus faecium species group includes E. faecium, Enterococcus durans, Enterococcus hirae, Enterococcus mundtii, Enterococcus porcinus and Enterococcus villorum (Klein, 2003
). The discrimination of enterococci from streptococci is mainly established by Lancefield group D antigen, as only Streptococcus bovis, Streptococcus alactolyticus and Streptococus equinus are serogroup D. These groups can be distinguished from Enterococcus species by the lack of growth in 6.5 % (w/v) sodium chloride at 10 °C. It is harder to distinguish Enterococcus species from other cocci that do not express the D group antigen such as Pediococcus, Lactococcus or Tetragenococcus species because no other phenotypic differences have been reported that allow distinction. Thus the use of fermentation patterns, enzyme activities such as pyroglutamyl aminopeptidase (PYRase) (Domig et al., 2003
), growth at defined temperatures and physiological characteristics is essential in the identification of Enterococcus species (Shanks et al., 2006
).
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| Physiology |
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When assessing growth of Enterococcus species using optical densities the most important variable of the growth conditions is pH, with temperature and salt concentration having a lesser effect (Gardin et al., 2001
). During the lag phase, temperature is the most important factor influencing growth, with stationary-phase cells being the most resistant to heat (Gardin et al., 2001
; Martinez et al., 2003
). The resistance of E. faecalis to a range of pH values is thought to be due to its membrane durability and impermeabilty to acid and alkali, although some studies have suggested that it may be associated with membrane-bound H+-ATPase activity (Nakajo et al., 2005
). Temperature resistance is also associated with membrane structure and has been related to lipid and fatty acid content. The membrane has been demonstrated to be more stable near the minimal temperature for growth, which is a specific mechanism associated with enterococci (Ivanov et al., 1999
). At higher temperatures enterococci are less resilient, with the membrane fatty acid content increasing and the saturated fatty acid levels decreasing. The heat resistance of enterococci is dependent not only on the temperature but also the phase of growth (Martinez et al., 2003
).
When E. faecalis is grown at non-stress temperatures, subsequently cultured cells do not have the resilience to warm and cold environments that would occur if the first generation were grown at stressful temperatures (Ivanov et al., 1999
). Three distinct temperature groups (10–13 °C, 17–22 °C and 42–47 °C) have been established for E. faecalis at which permeability of the membrane to 3 % NaCl is different. This has significant implications with regard to biotechnology and food science (Ivanov et al., 1999
).
The production of amines is also closely related to the growth temperature and pH. The production of decarboxylases is optimum at acid pH, whereas biogenic amine production by E. faecalis EF37 decreases at low pH. Temperature does not have a significant effect on amine production itself, but the effect that temperature has on cell yield alters the quantity of amines being produced (Gardin et al., 2001
). Other products of Enterococcus species that are affected by pH are bacteriocins.
| Bacteriocins |
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| Ecology and epidemiology |
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Studies of the ecology and epidemiology of Enterococcus have reported E. faecalis and E. faecium being regularly isolated from cheese, fish, sausages, minced beef and pork (Foulquie Moreno et al., 2006
; Klein, 2003
). Foods such as sausages and cheese that are of animal origin are often associated with contamination by Enterococcus species, as they are able to survive the heating process. In one study in the UK, samples taken from urban sewage and from farmland using pig manure and crops generated from this land, were found to be 100 % positive for Enterococcus species In crops to which animal fertilizers were not applied, the incidence of Enterococcus species was reduced to 33 % (Kuhn et al., 2003
). A similar study in Germany isolated 416 strains of Enterococcus from 155 samples of food of animal origin, 72 % of which were E. faecalis and 13 % E. faecium (Peters et al., 2003
).
The distribution of Enterococcus species varies throughout Europe. In Spain and the UK, E. faecalis and E. faecium are the most commonly isolated species from both clinical and environmental sources. Sweden has a lower incidence of E. faecium and a higher isolation rate of E. hirae, whereas in Denmark E. hirae is the dominant species and is isolated mainly from slaughtered animals (Kuhn et al., 2003
).
Clinical isolates of enterococci show a lower diversity than those obtained from the environment and other human sources, with E. faecalis being the dominant species (Kuhn et al., 2003
). The reason for this lack of diversity may be linked with the virulence factors associated with this species. The fact that Enterococcus species are opportunistic pathogens was highlighted by a study in Denmark which showed that hospitalized patients have a 57 % isolation rate of E. faecalis whereas healthy individuals show only a 39–40 % occurrence (Mutnick et al., 2003
). Hospitalized patients may have a greater incidence of enterococcal infection not only because of virulence, but because the hospital itself is a hub. This is illustrated by a report for the Department of Health in the UK, which highlighted the fact that enterococci may contaminate and survive around the patient for several days (Brown et al., 2006
). Enterococci also play a role in endodontic failure and are often isolated from the root canal system. The results of one study showed that out of 100 root-filled teeth with apical periodontitis, 69 % of the isolated bacteria were facultative and 50 % of those were enterococci (Dahlen et al., 2000
). E. faecalis is responsible for 80–90 % of human enterococcal endodontic infection and is usually the only Enterococcus species isolated from the obturated root canal (Love, 2001
; Peciuliene et al., 2001
).
| Rates of infection |
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| Antibiotic resistance |
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In both the Surveillance and Control of Pathogens of Epidemiological Importance (SCOPE) and SENTRY (Antimicrobial Resistance Surveillance Program) databases, figures show that, of enterococcal isolates from the bloodstream, 2 % of E. faecalis and 60 % of E. faecium isolates are resistant to vancomycin (Bearman & Wenzel, 2005
). Resistance rates of Enterococcus species have reached endemic or epidemic proportions in North America, with Europe having lower, but increasing, levels (Mutnick et al., 2003
). Enterococcal antibiotic resistance is not exclusive to the clinical arena but is also prevalent in the food industry. The presence of VRE in individuals who have been hospitalized, when they have not previously been in hospital or taken antibiotics, suggests that VRE may have been contracted through the food chain. GRE may emerge in the food chain through use of avoparcin in animal feed (Mannu et al., 2003
).
Glycopeptide resistance in enterococci involves a two-component system where the cell wall composition is altered from the peptidoglycan precurser D-Ala-D-Ala (vancomycin-susceptible) to D-Ala-D-lactate (D-Lac). The latter has 1000 times less affinity for vancomycin, while D-Ala-D-Ser has a sevenfold decrease in affinity for vancomycin, thus removing the susceptible target (Gilmore, 2002
). The genes involved in this two-component system are vanS/vanR. The VanS sensor kinase is activated in response to vancomycin, resulting in the activation of D-Lac or D-Ser peptidoglycan precursor and the repression of D-Ala-D-Ala (Stephenson & Hoch, 2002
). To date six gene clusters associated with glycopeptide resistance have been identified in Enterococcus species: vanA to vanG (Table 2
). The three main types of resistance are those encoded by the vanC, vanA and vanB clusters. Intrinsic vanC resistance is specific to E. gallinarum, E. casseliflavus and E. flavescens, and the vanC operon is chromosomally located and is not transferable. The vanA resistance operon comprises seven genes (vanH, vanA, vanX, vanR, vanS, vanY and vanZ) and is acquired through the Tn1546 transposon (Gilmore, 2002
). Over 100 enterococcal isolates from humans, animals and food have shown vanA resistance residing on Tn1546 (Williams & Hergenrother, 2008
). The transfer of vanB (acquired) resistance occurs through the exchange of transposon Tn1547 and/or Tn5382. Both vanA and vanB are present on the chromosome but can also be carried on a plasmid (Gilmore, 2002
; Klare et al., 2003
). Enterococcus species do not possess cytochrome enzymes and thus cannot produce the energy required to take up antibiotics into the cell. This means they show resistance to aminoglycosides at low levels (Klare et al., 2003
). Antibiotic resistance in Enterococcus species can be transferred by pheromone-mediated conjugative plasmids or transposons. The resistance genes may be passed on not only to antibiotic-susceptible enterococci, but also to other pathogens (Giraffa, 2002
).
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| Virulence |
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Extracellular surface protein (Esp) is a cell-wall-associated protein first described in Enterococcus species by Shankar et al. (1999)
. The esp gene consists of 5622 bp and is found at high frequency in infection-derived isolates. It is thought to promote adhesion, colonization and evasion of the immune system, and to play some role in antibiotic resistance (Foulquie Moreno et al., 2006
). Esp also contributes to enterococcal biofilm formation, which could lead to resistance to environmental stresses, and adhesion to eukaryotic cells such as those of the urinary tract (Borgmann et al., 2004
). Studies have shown that disruption of the esp gene impairs the ability of E. faecalis to form biofilms. Esp-negative E. faecalis strains, after receiving plasmid transfer of the esp gene, were able to produce biofilms (Latasa et al., 2006
). Twenty-one out of 28 clinical isolates of E. faecium were found to have sequences that were specific for the esp gene. This goes some way to suggesting that the esp gene may be associated with pathogenicity, since the esp gene was absent from dairy isolates (Mannu et al., 2003
). E. faecium strains that carry the gene espfm have higher conjugation rates than strains that do not possess this gene. They also demonstrate higher resistance to ampicillin, ciprofloxacin and imipenem (Billström et al., 2008
).
The ability of enterococci to produce biofilms is fundamental in causing endodontic and urinary tract infections, as well as endocarditis. The formation of pili by enterococci is necessary for biofilm formation, the gene cluster associated with this being ebp (endocarditis- and biofilm-associated pili). The ebp operon consists of ebpA, ebpB ebpC and an associated srtC (encoding sortase C) gene (Singh et al., 2007
). A non-piliated mutant of E. faecalis was unable to produce a biofilm (Budzik & Schneewind, 2006
). Enterococcal pili are heterotrimetric and the pilus shaft contains two minor pilins. A feature of Gram-positive pili is that a specific sortase is dedicated to their assembly (Mandlik et al., 2008
). The pili are constructed by cross-linking of multiple classes of precursor proteins that are assigned by sortases, which covalently anchor proteins with a C-terminal pilin-associated motif to the peptidoglycan (Nallapareddy et al., 2006
). E. faecalis contains two classes of sortase: sortase A links most proteins with a C-terminal sortase motif to cell wall peptidoglycan, while sortase C is designated Bps (biofilm and pilus-associated sortase) and links the pilin subunits.
Secreted virulence factors of Enterococcus species also have a function in pathogenesis. Cytolysin (also called haemolysin) is a bacterial toxin, the genes for the production of which are located on pheromone-responsive plasmids (Koch et al., 2004
). Cytolysin has β-haemolytic properties in humans and is bactericidal against other Gram-positive bacteria. The cylLs group of genes are the non-regulatory genes of the cytolysin operons (Hällgren et al., 2008
), and higher incidences of these genes occur in clinical isolates (33 %, compared to 6 % in food isolates) (Semedo et al., 2003
). Cytolysin is regulated by a quorum-sensing mechanism involving a two-component system.
A group of hydrolytic enzymes including hyaluronidases, gelatinase and serine protease are involved in the virulence of Enterococcus species, although their precise roles are yet to be clearly understood (Semedo et al., 2003
). Hyaluronidase acts on hyaluronic acid and is a degradative enzyme which is associated with tissue damage. Hyaluronidase depolymerizes the mucopolysaccharide moiety of connective tissue, thus facilitating spread of enterococci as well as their toxins through host tissue (Kayaoglu & Orstavik, 2004
). Hyaluronidase is encoded by the chromosomal hyl gene. One study showed that, out of 26 vancomycin-resistant E. faecium clinical isolates, seven (27 %) carried the hyl gene, but it was found in only 14 % of faecal isolates (Vankerckhoven et al., 2004
).
The main role of both gelatinase and serine protease in enterococcal pathogenesis is thought to be in providing nutrients to the bacteria by degrading host tissue, although they also have some function in biofilm formation (Gilmore, 2002
; Mohamed & Huang, 2007
). Gelatinase (GelE) is an extracellular zinc metallo-endopeptidase secreted by E. faecalis (Koch et al., 2004
). It is able to hydrolyse gelatin, casein, haemoglobin and other bioactive peptides. The gene (gelE) encoding GelE is located on the chromosome and is regulated in a cell-density-dependent manner. Another gene sprE, coding for a serine protease, is located directly downstream from and is cotranscribed with gelE (De Fátima Silva Lopes et al., 2006
). Transcription of gelE and sprE is regulated in a growth-phase-dependent fashion by the quorum-sensing system encoded by the fsr (faecal streptococci regulator) locus (Sifri et al., 2002
).
Quorum sensing occurs when a bacterial population produces a signal via an autoinducing peptide (AIP), regulated by a two-component system. AIP then accumulates in the environment by increased expression of the communication signal, or by increased numbers of cells producing the signal. Once the AIP reaches a threshold concentration, it interacts with a cell-surface receptor or re-enters the cell and causes a cascade of transcriptional regulation (Alksne & Projan, 2000
; Gobbetti et al., 2007
). The fsr locus contains the fsrA, fsrB and fsrC genes. The fsrA gene is monocistronically transcribed into a response regulator, and fsrB and fsrC, encoding a processing enzyme and a sensor kinase respectively, are co-transcribed (Podbielski & Kreikemeyer, 2004
). FsrB liberates gelatinase biosynthesis activating pheromone (GBAP) peptide, and with the accumulation of GBAP a transition from exponential to stationary phase occurs and gelE and sprE are induced. It has been shown that in E. faecalis when mutations in fsrA, fsrB and fsrC are present, a reduction in biofilm formation of 28–32 % occurs (Mohamed & Huang, 2007
). All of 12 E. faecalis endocarditis strains were positive for the fsr locus while 10 out of 19 stool strains had the fsr locus, indicating the importance of fsr in virulence and disease (Podbielski & Kreikemeyer, 2004
).
| Conclusions |
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