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Microbiology
Supplementary Material

Supplementary material related to the following articles is available online:

From the Current Issue: 154 (7); [Table of Contents]

Xhavit Zogaj, Subhra Chakraborty, Jirong Liu, David G. Thanassi, and Karl E. Klose

Characterization of the Francisella tularensis subsp. novicida type IV pilus
Microbiology 2008; 154(7): 2139-2150 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Dongru Qiu, Vonya M. Eisinger, Nathan E. Head, Gerald B. Pier, and Hongwei D. Yu

ClpXP proteases positively regulate alginate overexpression and mucoid conversion in Pseudomonas aeruginosa
Microbiology 2008; 154(7): 2119-2130 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Irena Kukavica-Ibrulj, François Sanschagrin, Ashley Peterson, Marvin Whiteley, Brian Boyle, John MacKay, and Roger C. Levesque

Functional genomics of PycR, a LysR family transcriptional regulator essential for maintenance of Pseudomonas aeruginosa in the rat lung
Microbiology 2008; 154(7): 2106-2118 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Nagarajan Thirunavukkarasu, Mukti Nath Mishra, Stijn Spaepen, Jos Vanderleyden, Carol A. Gross, and Anil K. Tripathi

An extra-cytoplasmic function sigma factor and anti-sigma factor control carotenoid biosynthesis in Azospirillum brasilense
Microbiology 2008; 154(7): 2096-2105 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Hongyue Dang, Xiaoxia Zhang, Jin Sun, Tiegang Li, Zhinan Zhang, and Guanpin Yang

Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea
Microbiology 2008; 154(7): 2084-2095 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Loretta Jackson-Hayes, Terry W. Hill, Darlene M. Loprete, Lauren M. Fay, Barbara S. Gordon, Sonia A. Nkashama, Ravi K. Patel, and Caroline V. Sartain

Two GDP-mannose transporters contribute to hyphal form and cell wall integrity in Aspergillus nidulans
Microbiology 2008; 154(7): 2037-2047 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Luciana Gualdi, Letizia Tagliabue, Stefano Bertagnoli, Teresa Ieranò, Cristina De Castro, and Paolo Landini

Cellulose modulates biofilm formation by counteracting curli-mediated colonization of solid surfaces in Escherichia coli
Microbiology 2008; 154(7): 2017-2024 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Yanjie Li, Lei Zhang, Depeng Wang, Hui Zhou, Haomiao Ouyang, Jia Ming, and Cheng Jin

Deletion of the msdS/AfmsdC gene induces abnormal polarity and septation in Aspergillus fumigatus
Microbiology 2008; 154(7): 1960-1972 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Table]

Julia M.-L. Sung, David H. Lloyd, and Jodi A. Lindsay

Staphylococcus aureus host specificity: comparative genomics of human versus animal isolates by multi-strain microarray
Microbiology 2008; 154(7): 1949-1959 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Ave Tooming-Klunderud, Bjørg Mikalsen, Tom Kristensen, and Kjetill S. Jakobsen

The mosaic structure of the mcyABC operon in Microcystis
Microbiology 2008; 154(7): 1886-1899 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Yukiko Taniuchi, Shinya Yoshikawa, Shin-ichi Maeda, Tatsuo Omata, and Kaori Ohki

Diazotrophy under continuous light in a marine unicellular diazotrophic cyanobacterium, Gloeothece sp. 68DGA
Microbiology 2008; 154(7): 1859-1865 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

From Past Issues:

Suleyman Felek, Matthew B. Lawrenz, and Eric S. Krukonis

The Yersinia pestis autotransporter YapC mediates host cell binding, autoaggregation and biofilm formation
Microbiology 2008; 154(6): 1802-1812 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Satoshi Yuhara, Harunobu Komatsu, Hiroyuki Goto, Yoshiyuki Ohtsubo, Yuji Nagata, and Masataka Tsuda

Pleiotropic roles of iron-responsive transcriptional regulator Fur in Burkholderia multivorans
Microbiology 2008; 154(6): 1763-1774 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Tables]

Naomi E. Kramer, Hester E. Hasper, Patrick T. C. van den Bogaard, Siegfried Morath, Ben de Kruijff, Thomas Hartung, Eddy J. Smid, Eefjan Breukink, Jan Kok, and Oscar P. Kuipers

Increased D-alanylation of lipoteichoic acid and a thickened septum are main determinants in the nisin resistance mechanism of Lactococcus lactis
Microbiology 2008; 154(6): 1755-1762 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Figure]

S. Lohmiller, K. Hantke, S. I. Patzer, and V. Braun

TonB-dependent maltose transport by Caulobacter crescentus
Microbiology 2008; 154(6): 1748-1754 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Table]

Renato León and Guadalupe Espín

flhDC, but not fleQ, regulates flagella biogenesis in Azotobacter vinelandii, and is under AlgU and CydR negative control
Microbiology 2008; 154(6): 1719-1728 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Tables]

Timothy J. Kurtti and Nemat O. Keyhani

Intracellular infection of tick cell lines by the entomopathogenic fungus Metarhizium anisopliae
Microbiology 2008; 154(6): 1700-1709 [Abstract] [Full Text]  

Article supplement(s): [Supplementary videos]

Chiara Cipollina, Joost van den Brink, Pascale Daran-Lapujade, Jack T. Pronk, Danilo Porro, and Johannes H. de Winde

Saccharomyces cerevisiae SFP1: at the crossroads of central metabolism and ribosome biogenesis
Microbiology 2008; 154(6): 1686-1699 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Yun Kang, David T. Nguyen, Mike S. Son, and Tung T. Hoang

The Pseudomonas aeruginosa PsrA responds to long-chain fatty acid signals to regulate the fadBA5 β-oxidation operon
Microbiology 2008; 154(6): 1584-1598 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Gregory L. Challis

Mining microbial genomes for new natural products and biosynthetic pathways
Microbiology 2008; 154(6): 1555-1569 [Abstract] [Full Text]  

Article supplement(s): [Interview with the author]

Michelle A. Hubbard and Susan G. W. Kaminskyj

Rapid tip-directed movement of Golgi equivalents in growing Aspergillus nidulans hyphae suggests a mechanism for delivery of growth-related materials
Microbiology 2008; 154(5): 1544-1553 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Kim-Ly Chhour, Lyn A. Hinds, Elizabeth M. Deane, and Nicholas A. Jacques

The microbiome of the cloacal openings of the urogenital and anal tracts of the tammar wallaby, Macropus eugenii
Microbiology 2008; 154(5): 1535-1543 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Sanjay S. Hiremath, Anuradha Chowdhary, Tusharantak Kowshik, Harbans S. Randhawa, Sheng Sun, and Jianping Xu

Long-distance dispersal and recombination in environmental populations of Cryptococcus neoformans var. grubii from India
Microbiology 2008; 154(5): 1513-1524 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Dolores Cordoba Cañero and M. Isabel G. Roncero

Influence of the chloride channel of Fusarium oxysporum on extracellular laccase activity and virulence on tomato plants
Microbiology 2008; 154(5): 1474-1481 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Dimitry Yu. Sorokin, Tatjana P. Tourova, Anne M. Henstra, Alfons J. M. Stams, Erwin A. Galinski, and Gerard Muyzer

Sulfidogenesis under extremely haloalkaline conditions by Desulfonatronospira thiodismutans gen. nov., sp. nov., and Desulfonatronospira delicata sp. nov. – a novel lineage of Deltaproteobacteria from hypersaline soda lakes
Microbiology 2008; 154(5): 1444-1453 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Roland H. Müller, Thore Rohwerder, and Hauke Harms

Degradation of fuel oxygenates and their main intermediates by Aquincola tertiaricarbonis L108
Microbiology 2008; 154(5): 1414-1421 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Miguel Balado, Carlos R. Osorio, and Manuel L. Lemos

Biosynthetic and regulatory elements involved in the production of the siderophore vanchrobactin in Vibrio anguillarum
Microbiology 2008; 154(5): 1400-1413 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Ivan Rychlík, Helena Hradecka, and Marcela Malcova

Salmonella enterica serovar Typhimurium typing by prophage-specific PCR
Microbiology 2008; 154(5): 1384-1389 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Javier F. Mariscotti and Francisco García-del Portillo

Instability of the Salmonella RcsCDB signalling system in the absence of the attenuator IgaA
Microbiology 2008; 154(5): 1372-1383 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Iain C. Sutcliffe, Gary W. Black, and Dean J. Harrington

Bioinformatic insights into the biosynthesis of the Group B carbohydrate in Streptococcus agalactiae
Microbiology 2008; 154(5): 1354-1363 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Cecilia Quiroga, Paul H. Roy, and Daniela Centrón

The S.ma.I2 class C group II intron inserts at integron attC sites
Microbiology 2008; 154(5): 1341-1353 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Germán E. Piñas, Paulo R. Cortes, Andrea G. Albarracín Orio, and José Echenique

Acidic stress induces autolysis by a CSP-independent ComE pathway in Streptococcus pneumoniae
Microbiology 2008; 154(5): 1300-1308 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Jingru Sun, Jennifer Kintner, and Robert V. Schoborg

The host adherens junction molecule nectin-1 is downregulated in Chlamydia trachomatis-infected genital epithelial cells
Microbiology 2008; 154(5): 1290-1299 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Martina A. Friedl, Monika Schmoll, Christian P. Kubicek, and Irina S. Druzhinina

Photostimulation of Hypocrea atroviridis growth occurs due to a cross-talk of carbon metabolism, blue light receptors and response to oxidative stress
Microbiology 2008; 154(4): 1229-1241 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Paul C. Mills, Gary Rowley, Stephen Spiro, Jay C. D. Hinton, and David J. Richardson

A combination of cytochrome c nitrite reductase (NrfA) and flavorubredoxin (NorV) protects Salmonella enterica serovar Typhimurium against killing by NO in anoxic environments
Microbiology 2008; 154(4): 1218-1228 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Jochen Kleemann, Hiroyuki Takahara, Kurt Stüber, and Richard O'Connell

Identification of soluble secreted proteins from appressoria of Colletotrichum higginsianum by analysis of expressed sequence tags
Microbiology 2008; 154(4): 1204-1217 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Jan Hegermann, Sven Halbedel, Roger Dumke, Jörg Regula, Razif R. Gabdoulline, Frank Mayer, Jörg Stülke, and Richard Herrmann

The acidic, glutamine-rich Mpn474 protein of Mycoplasma pneumoniae is surface exposed and covers the complete cell
Microbiology 2008; 154(4): 1185-1192 [Abstract] [Full Text]  

Article supplement(s): [Supplementary material]

Suzanne J. C. Verhaegh, André Streefland, Joy K. Dewnarain, David J. Farrell, Alex van Belkum, and John P. Hays

Age-related genotypic and phenotypic differences in Moraxella catarrhalis isolates from children and adults presenting with respiratory disease in 2001–2002
Microbiology 2008; 154(4): 1178-1184 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Margaret E. Bauer, Kate R. Fortney, Alistair Harrison, Diane M. Janowicz, Robert S. Munson, and Stanley M. Spinola

Identification of Haemophilus ducreyi genes expressed during human infection
Microbiology 2008; 154(4): 1152-1160 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Stewart J. Hinchliffe, Sarah L. Howard, Yahui H. Huang, David J. Clarke, and Brendan W. Wren

The importance of the Rcs phosphorelay in the survival and pathogenesis of the enteropathogenic yersiniae
Microbiology 2008; 154(4): 1117-1131 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Karina Brinkrolf, Svenja Plöger, Sandra Solle, Iris Brune, Svenja S. Nentwich, Andrea T. Hüser, Jörn Kalinowski, Alfred Pühler, and Andreas Tauch

The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences
Microbiology 2008; 154(4): 1068-1081 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Paul Golby, Javier Nunez, Paul J. Cockle, Katie Ewer, Karen Logan, Philip Hogarth, H. Martin Vordermeier, Jason Hinds, R. Glyn Hewinson, and Stephen V. Gordon

Characterization of two in vivo-expressed methyltransferases of the Mycobacterium tuberculosis complex: antigenicity and genetic regulation
Microbiology 2008; 154(4): 1059-1067 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

David P. Fewer, Ave Tooming-Klunderud, Jouni Jokela, Matti Wahlsten, Leo Rouhiainen, Tom Kristensen, Thomas Rohrlack, Kjetill S. Jakobsen, and Kaarina Sivonen

Natural occurrence of microcystin synthetase deletion mutants capable of producing microcystins in strains of the genus Anabaena (Cyanobacteria)
Microbiology 2008; 154(4): 1007-1014 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Jiraporn Jirakkakul, Juntira Punya, Somchai Pongpattanakitshote, Porntip Paungmoung, Namol Vorapreeda, Anuwat Tachaleat, Cheeranun Klomnara, Morakot Tanticharoen, and Supapon Cheevadhanarak

Identification of the nonribosomal peptide synthetase gene responsible for bassianolide synthesis in wood-decaying fungus Xylaria sp. BCC1067
Microbiology 2008; 154(4): 995-1006 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Claire Lewis, Henrieta Skovierova, Gary Rowley, Bronislava Rezuchova, Dagmar Homerova, Andrew Stevenson, Aileen Sherry, Jan Kormanec, and Mark Roberts

Small outer-membrane lipoprotein, SmpA, is regulated by ^E and has a role in cell envelope integrity and virulence of Salmonella enterica serovar Typhimurium
Microbiology 2008; 154(3): 979-988 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Jennifer Vanover, Jingru Sun, Srilekha Deka, Jennifer Kintner, Michelle M. Duffourc, and Robert V. Schoborg

Herpes simplex virus co-infection-induced Chlamydia trachomatis persistence is not mediated by any known persistence inducer or anti-chlamydial pathway
Microbiology 2008; 154(3): 971-978 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Rajan P. Adhikari and Richard P. Novick

Regulatory organization of the staphylococcal sae locus
Microbiology 2008; 154(3): 949-959 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

S. Témoin, S. M. Roche, O. Grépinet, Y. Fardini, and P. Velge

Multiple point mutations in virulence genes explain the low virulence of Listeria monocytogenes field strains
Microbiology 2008; 154(3): 939-948 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Lilian Galbis-Martínez, Marisa Galbis-Martínez, Francisco J. Murillo, and Marta Fontes

An anti-antisigma factor in the response of the bacterium Myxococcus xanthus to blue light
Microbiology 2008; 154(3): 895-904 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Figure]

Martin T. Edwards, Norman K. Fry, and Timothy G. Harrison

Clonal population structure of Legionella pneumophila inferred from allelic profiling
Microbiology 2008; 154(3): 852-864 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Tomoko Iwaki, Haruyuki Iefuji, Yoshikazu Hiraga, Akira Hosomi, Tomotake Morita, Yuko Giga-Hama, and Kaoru Takegawa

Multiple functions of ergosterol in the fission yeast Schizosaccharomyces pombe
Microbiology 2008; 154(3): 830-841 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Leong-Keat Chan, Timothy S. Weber, Rachael M. Morgan-Kiss, and Thomas E. Hanson

A genomic region required for phototrophic thiosulfate oxidation in the green sulfur bacterium Chlorobium tepidum (syn. Chlorobaculum tepidum)
Microbiology 2008; 154(3): 818-829 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Yohei Hizukuri, Seiji Kojima, Toshiharu Yakushi, Ikuro Kawagishi, and Michio Homma

Systematic Cys mutagenesis of FlgI, the flagellar P-ring component of Escherichia coli
Microbiology 2008; 154(3): 810-817 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Karin Förster-Fromme, Ava Chattopadhyay, and Dieter Jendrossek

Biochemical characterization of AtuD from Pseudomonas aeruginosa, the first member of a new subgroup of acyl-CoA dehydrogenases with specificity for citronellyl-CoA
Microbiology 2008; 154(3): 789-796 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Choong-Min Kang, Seeta Nyayapathy, Jung-Yeon Lee, Joo-Won Suh, and Robert N. Husson

Wag31, a homologue of the cell division protein DivIVA, regulates growth, morphology and polar cell wall synthesis in mycobacteria
Microbiology 2008; 154(3): 725-735 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Steven E. Passmore, Rithy Meas, and Donna L. Marykwas

Analysis of the FliM/FliG motor protein interaction by two-hybrid mutation suppression analysis
Microbiology 2008; 154(3): 714-724 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Michael Niederweis

Nutrient acquisition by mycobacteria
Microbiology 2008; 154(3): 679-692 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Sandeepa M. Eswarappa, Kiran Kumar Panguluri, Michael Hensel, and Dipshikha Chakravortty

The yejABEF operon of Salmonella confers resistance to antimicrobial peptides and contributes to its virulence
Microbiology 2008; 154(2): 666-678 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables and figures]

Jayasimha Rao, Antonio DiGiandomenico, Jason Unger, Yongde Bao, Renata K. Polanowska-Grabowska, and Joanna B. Goldberg

A novel oxidized low-density lipoprotein-binding protein from Pseudomonas aeruginosa
Microbiology 2008; 154(2): 654-665 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Stuart Hunt, Arthur J. G. Moir, Svetomir Tzokov, Per A. Bullough, Peter J. Artymiuk, and Jeffrey Green

The formation and structure of Escherichia coli K-12 haemolysin E pores
Microbiology 2008; 154(2): 633-642 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

C. K. Cote, J. Bozue, K. L. Moody, T. L. DiMezzo, C. E. Chapman, and S. L. Welkos

Analysis of a novel spore antigen in Bacillus anthracis that contributes to spore opsonization
Microbiology 2008; 154(2): 619-632 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Eugenia Silva-Herzog, Franco Ferracci, Michael W. Jackson, Sabrina S. Joseph, and Gregory V. Plano

Membrane localization and topology of the Yersinia pestis YscJ lipoprotein
Microbiology 2008; 154(2): 593-607 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Christina Bronowski, Shirley L. Smith, Kyoko Yokota, John E. Corkill, Helen M. Martin, Barry J. Campbell, Jonathan M. Rhodes, C. Anthony Hart, and Craig Winstanley

A subset of mucosa-associated Escherichia coli isolates from patients with colon cancer, but not Crohn's disease, share pathogenicity islands with urinary pathogenic E. coli
Microbiology 2008; 154(2): 571-583 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Atsushi Iguchi, Tadasuke Ooka, Yoshitoshi Ogura, Asadulghani, Keisuke Nakayama, Gad Frankel, and Tetsuya Hayashi

Genomic comparison of the O-antigen biosynthesis gene clusters of Escherichia coli O55 strains belonging to three distinct lineages
Microbiology 2008; 154(2): 559-570 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Carl Hamsten, Joakim Westberg, Göran Bölske, Roger Ayling, Mathias Uhlén, and Anja Persson

Expression and immunogenicity of six putative variable surface proteins in Mycoplasma mycoides subsp. mycoides SC
Microbiology 2008; 154(2): 539-549 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Wenjun Li, Florence Fenollar, Jean-Marc Rolain, Pierre-Edouard Fournier, Gerhard E. Feurle, Christian Müller, Verena Moos, Thomas Marth, Martin Altwegg, Romana C. Calligaris-Maibach, Thomas Schneider, Federico Biagi, Bernard La Scola, and Didier Raoult

Genotyping reveals a wide heterogeneity of Tropheryma whipplei
Microbiology 2008; 154(2): 521-527 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Paulo Canessa, José Miguel Álvarez, Rubén Polanco, Paulina Bull, and Rafael Vicuña

The copper-dependent ACE1 transcription factor activates the transcription of the mco1 gene from the basidiomycete Phanerochaete chrysosporium
Microbiology 2008; 154(2): 491-499 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

John P. Bowman, Claudio R. Bittencourt, and Tom Ross

Differential gene expression of Listeria monocytogenes during high hydrostatic pressure processing
Microbiology 2008; 154(2): 462-475 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data files]

Xu Peng

Evidence for the horizontal transfer of an integrase gene from a fusellovirus to a pRN-like plasmid within a single strain of Sulfolobus and the implications for plasmid survival
Microbiology 2008; 154(2): 383-391 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

David E. Whitworth and Peter J. A. Cock

Two-component systems of the myxobacteria: structure, diversity and evolutionary relationships
Microbiology 2008; 154(2): 360-372 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Chiara Cipollina, Joost van den Brink, Pascale Daran-Lapujade, Jack T. Pronk, Marina Vai, and Johannes H. de Winde

Revisiting the role of yeast Sfp1 in ribosome biogenesis and cell size control: a chemostat study
Microbiology 2008; 154(1): 337-346 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Yoon-E Choi and Won-Bo Shim

Functional characterization of Fusarium verticillioides CPP1, a gene encoding a putative protein phosphatase 2A catalytic subunit
Microbiology 2008; 154(1): 326-336 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Jennifer M. Hatchel and Mitchell F. Balish

Attachment organelle ultrastructure correlates with phylogeny, not gliding motility properties, in Mycoplasma pneumoniae relatives
Microbiology 2008; 154(1): 286-295 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Aarti Gautam, Marianne Hathaway, Natalie McClain, Geeta Ramesh, and Ramesh Ramamoorthy

Analysis of the determinants of bba64 (P35) gene expression in Borrelia burgdorferi using a gfp reporter
Microbiology 2008; 154(1): 275-285 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Yuya Tanaka, Naoko Okai, Haruhiko Teramoto, Masayuki Inui, and Hideaki Yukawa

Regulation of the expression of phosphoenolpyruvate : carbohydrate phosphotransferase system (PTS) genes in Corynebacterium glutamicum R
Microbiology 2008; 154(1): 264-274 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Karin Denger, Sonja Weinitschke, Theo H. M. Smits, David Schleheck, and Alasdair M. Cook

Bacterial sulfite dehydrogenases in organotrophic metabolism: separation and identification in Cupriavidus necator H16 and in Delftia acidovorans SPH-1
Microbiology 2008; 154(1): 256-263 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Sunita Sinha, Ole Herman Ambur, Paul R. Langford, Tone Tønjum, and J. Simon Kroll

Reduced DNA binding and uptake in the absence of DsbA1 and DsbA2 of Neisseria meningitidis due to inefficient folding of the outer-membrane secretin PilQ
Microbiology 2008; 154(1): 217-225 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Geraldine Bresolin, Janja Trcek, Siegfried Scherer, and Thilo M. Fuchs

Presence of a functional flagellar cluster Flag-2 and low-temperature expression of flagellar genes in Yersinia enterocolitica W22703
Microbiology 2008; 154(1): 196-206 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Thibaut de Sablet, Yolande Bertin, Marjolaine Vareille, Jean-Pierre Girardeau, Annie Garrivier, Alain P. Gobert, and Christine Martin

Differential expression of stx₂ variants in Shiga toxin-producing Escherichia coli belonging to seropathotypes A and C
Microbiology 2008; 154(1): 176-186 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Barbara Baert, Christine Baysse, Sandra Matthijs, and Pierre Cornelis

Multiple phenotypic alterations caused by a c-type cytochrome maturation ccmC gene mutation in Pseudomonas aeruginosa
Microbiology 2008; 154(1): 127-138 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Filipe Santos, Jose L. Vera, René van der Heijden, Graciela Valdez, Willem M. de Vos, Fernando Sesma, and Jeroen Hugenholtz

The complete coenzyme B₁₂ biosynthesis gene cluster of Lactobacillus reuteri CRL1098
Microbiology 2008; 154(1): 81-93 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Kazuo Kobayashi, Ritsuko Kuwana, and Hiromu Takamatsu

kinA mRNA is missing a stop codon in the undomesticated Bacillus subtilis strain ATCC 6051
Microbiology 2008; 154(1): 54-63 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Derek E. Chen, Sheila Podell, John-Demian Sauer, Michele S. Swanson, and Milton H. Saier

The phagosomal nutrient transporter (Pht) family
Microbiology 2008; 154(1): 42-53 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Thomas Hindré, Holger Brüggemann, Carmen Buchrieser, and Yann Héchard

Transcriptional profiling of Legionella pneumophila biofilm cells and the influence of iron on biofilm formation
Microbiology 2008; 154(1): 30-41 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Carey-Ann D. Burnham, Sandra E. Shokoples, and Gregory J. Tyrrell

Invasion of HeLa cells by group B streptococcus requires the phosphoinositide-3-kinase signalling pathway and modulates phosphorylation of host-cell Akt and glycogen synthase kinase-3
Microbiology 2007; 153(12): 4240-4252 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Milce Costa, Clayton L. Borges, Alexandre M. Bailão, Gabriela V. Meirelles, Yuri A. Mendonça, Sabrina F. I. M. Dantas, Fabrícia P. de Faria, Maria S. S. Felipe, Eugênia E. W. I. Molinari-Madlum, Maria J. S. Mendes-Giannini, Rogério B. Fiuza, Wellington S. Martins, Maristela Pereira, and Célia M. A. Soares

Transcriptome profiling of Paracoccidioides brasiliensis yeast-phase cells recovered from infected mice brings new insights into fungal response upon host interaction
Microbiology 2007; 153(12): 4194-4207 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

V. Encheva, R. Wait, S. Begum, S. E. Gharbia, and H. N. Shah

Protein expression diversity amongst serovars of Salmonella enterica
Microbiology 2007; 153(12): 4183-4193 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Jae-Gu Seo, Sae W. Park, Hyuk Park, Seo Y. Kim, Young T. Ro, Eungbin Kim, Jin W. Cho, and Young M. Kim

Cloning, characterization and expression of a gene encoding dihydroxyacetone synthase in Mycobacterium sp. strain JC1 DSM 3803
Microbiology 2007; 153(12): 4174-4182 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Fatma Karray, Emmanuelle Darbon, Nathalie Oestreicher, Hélène Dominguez, Karine Tuphile, Josette Gagnat, Marie-Hélène Blondelet-Rouault, Claude Gerbaud, and Jean-Luc Pernodet

Organization of the biosynthetic gene cluster for the macrolide antibiotic spiramycin in Streptomyces ambofaciens
Microbiology 2007; 153(12): 4111-4122 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Dagmara Jakimowicz, Anna Brzostek, Anna Rumijowska-Galewicz, Paulina Zydek, Alicja Dolzblasz, Aleksandra Smulczyk-Krawczyszyn, Tomasz Zimniak, Lukasz Wojtasz, Anna Zawilak-Pawlik, Agnieszka Kois, Jaroslaw Dziadek, and Jolanta Zakrzewska-Czerwinska

Characterization of the mycobacterial chromosome segregation protein ParB and identification of its target in Mycobacterium smegmatis
Microbiology 2007; 153(12): 4050-4060 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Yasuyuki Kawaharada, Shima Eda, Kiwamu Minamisawa, and Hisayuki Mitsui

A Mesorhizobium loti mutant with reduced glucan content shows defective invasion of its host plant Lotus japonicus
Microbiology 2007; 153(12): 3983-3993 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Mark H. J. Sturme, Christof Francke, Roland J. Siezen, Willem M. de Vos, and Michiel Kleerebezem

Making sense of quorum sensing in lactobacilli: a special focus on Lactobacillus plantarum WCFS1
Microbiology 2007; 153(12): 3939-3947 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Are Klevan, Nicolas J. Tourasse, Fredrik B. Stabell, Anne-Brit Kolstø, and Ole Andreas Økstad

Exploring the evolution of the Bacillus cereus group repeat element bcr1 by comparative genome analysis of closely related strains
Microbiology 2007; 153(11): 3894-3908 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Ryohei Ueno, Volker A. R. Huss, Naoto Urano, and Shugo Watabe

Direct evidence for redundant segmental replacement between multiple 18S rRNA genes in a single Prototheca strain
Microbiology 2007; 153(11): 3879-3893 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Marco J. L. de Groot, Pascale Daran-Lapujade, Bas van Breukelen, Theo A. Knijnenburg, Erik A. F. de Hulster, Marcel J. T. Reinders, Jack T. Pronk, Albert J. R. Heck, and Monique Slijper

Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes
Microbiology 2007; 153(11): 3864-3878 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Peter Schierack, Nicole Walk, Katja Reiter, Karl D. Weyrauch, and Lothar H. Wieler

Composition of intestinal Enterobacteriaceae populations of healthy domestic pigs
Microbiology 2007; 153(11): 3830-3837 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Urs Albers, André Tiaden, Thomas Spirig, Denise Al Alam, Sanna M. Goyert, Sophie C. Gangloff, and Hubert Hilbi

Expression of Legionella pneumophila paralogous lipid A biosynthesis genes under different growth conditions
Microbiology 2007; 153(11): 3817-3829 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Khaled A. Aly and Christian Baron

The VirB5 protein localizes to the T-pilus tips in Agrobacterium tumefaciens
Microbiology 2007; 153(11): 3766-3775 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Yun Zhang, Ying-Fei Ma, Su-Wei Qi, Bo Meng, Muhammad Tausif Chaudhry, Si-Qi Liu, and Shuang-Jiang Liu

Responses to arsenate stress by Comamonas sp. strain CNB-1 at genetic and proteomic levels
Microbiology 2007; 153(11): 3713-3721 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Yuuhiko Tanabe, Fumie Kasai, and Makoto M. Watanabe

Multilocus sequence typing (MLST) reveals high genetic diversity and clonal population structure of the toxic cyanobacterium Microcystis aeruginosa
Microbiology 2007; 153(11): 3695-3703 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Akiyoshi Higo, Takayuki Suzuki, Masahiko Ikeuchi, and Masayuki Ohmori

Dynamic transcriptional changes in response to rehydration in Anabaena sp. PCC 7120
Microbiology 2007; 153(11): 3685-3694 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Mariam Ibrahim, Pierre Nicolas, Philippe Bessières, Alexander Bolotin, Véronique Monnet, and Rozenn Gardan

A genome-wide survey of short coding sequences in streptococci
Microbiology 2007; 153(11): 3631-3644 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Joël F. Pothier, Florence Wisniewski-Dyé, Michèle Weiss-Gayet, Yvan Moënne-Loccoz, and Claire Prigent-Combaret

Promoter-trap identification of wheat seed extract-induced genes in the plant-growth-promoting rhizobacterium Azospirillum brasilense Sp245
Microbiology 2007; 153(10): 3608-3622 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Stijn van der Veen, Torsten Hain, Jeroen A. Wouters, Hamid Hossain, Willem M. de Vos, Tjakko Abee, Trinad Chakraborty, and Marjon H. J. Wells-Bennik

The heat-shock response of Listeria monocytogenes comprises genes involved in heat shock, cell division, cell wall synthesis, and the SOS response
Microbiology 2007; 153(10): 3593-3607 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Maddalena V. Coppi, Regina A. O'Neil, Ching Leang, Franz Kaufmann, Barbara A. Methé, Kelly P. Nevin, Trevor L. Woodard, Anna Liu, and Derek R. Lovley

Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction
Microbiology 2007; 153(10): 3572-3585 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Erin C. Boyle, Nat F. Brown, John H. Brumell, and B. Brett Finlay

Src homology domain 2 adaptors affect adherence of Salmonella enterica serovar Typhimurium to non-phagocytic cells
Microbiology 2007; 153(10): 3517-3526 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Birte Meyer and Jan Kuever

Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes
Microbiology 2007; 153(10): 3478-3498 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Eun-Min Cho, Brett H. Kirkland, Diane J. Holder, and Nemat O. Keyhani

Phage display cDNA cloning and expression analysis of hydrophobins from the entomopathogenic fungus Beauveria (Cordyceps) bassiana
Microbiology 2007; 153(10): 3438-3447 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Evangelina Campos, Cristina Montella, Fernando Garces, Laura Baldoma, Juan Aguilar, and Josefa Badia

Aerobic L-ascorbate metabolism and associated oxidative stress in Escherichia coli
Microbiology 2007; 153(10): 3399-3408 [Abstract] [Full Text]  

Article supplement(s): [Erratum]

Paul Golby, Kim A. Hatch, Joanna Bacon, Rory Cooney, Paul Riley, Jon Allnutt, Jason Hinds, Javier Nunez, Philip D. Marsh, R. Glyn Hewinson, and Stephen V. Gordon

Comparative transcriptomics reveals key gene expression differences between the human and bovine pathogens of the Mycobacterium tuberculosis complex
Microbiology 2007; 153(10): 3323-3336 [Abstract] [Full Text]  

Article supplement(s): [HTML Page - index.htslp]

Jan van Ooyen and Jörg Soppa

Three 2-oxoacid dehydrogenase operons in Haloferax volcanii: expression, deletion mutants and evolution
Microbiology 2007; 153(10): 3303-3313 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Joseph M. Sturino and Todd R. Klaenhammer

Inhibition of bacteriophage replication in Streptococcus thermophilus by subunit poisoning of primase
Microbiology 2007; 153(10): 3295-3302 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Yannick Lequette, Eglantine Rollet, Aurélie Delangle, E. Peter Greenberg, and Jean-Pierre Bohin

Linear osmoregulated periplasmic glucans are encoded by the opgGH locus of Pseudomonas aeruginosa
Microbiology 2007; 153(10): 3255-3263 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Abhignya Subedi, Carles Ubeda, Rajan P. Adhikari, José R. Penadés, and Richard P. Novick

Sequence analysis reveals genetic exchanges and intraspecific spread of SaPI2, a pathogenicity island involved in menstrual toxic shock
Microbiology 2007; 153(10): 3235-3245 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Simon H. Miller, Rachel M. Elliot, John T. Sullivan, and Clive W. Ronson

Host-specific regulation of symbiotic nitrogen fixation in Rhizobium leguminosarum biovar trifolii
Microbiology 2007; 153(9): 3184-3195 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Sylvie Chauvaux, Marie-Laure Rosso, Lionel Frangeul, Céline Lacroix, Laurent Labarre, Angèle Schiavo, Michaël Marceau, Marie-Agnès Dillies, Jeannine Foulon, Jean-Yves Coppée, Claudine Médigue, Michel Simonet, and Elisabeth Carniel

Transcriptome analysis of Yersinia pestis in human plasma: an approach for discovering bacterial genes involved in septicaemic plague
Microbiology 2007; 153(9): 3112-3124 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Nahid Kamal, Nick Dorrell, Aparna Jagannathan, Susan M. Turner, Chrystala Constantinidou, David J. Studholme, Gemma Marsden, Jason Hinds, Ken G. Laing, Brendan W. Wren, and Charles W. Penn

Deletion of a previously uncharacterized flagellar-hook-length control gene fliK modulates the ⁵⁴-dependent regulon in Campylobacter jejuni
Microbiology 2007; 153(9): 3099-3111 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Tobias D. Schoep and Keith Gregg

Isolation and characterization of putative Pseudobutyrivibrio ruminis promoters
Microbiology 2007; 153(9): 3071-3080 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Seiya Watanabe, Ahmed Abu Saleh, Seung Pil Pack, Narayana Annaluru, Tsutomu Kodaki, and Keisuke Makino

Ethanol production from xylose by recombinant Saccharomyces cerevisiae expressing protein-engineered NADH-preferring xylose reductase from Pichia stipitis
Microbiology 2007; 153(9): 3044-3054 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Malgorzata A. Gil, Katherine E. Sherwood, and Julie A. Maupin-Furlow

Transcriptional linkage of Haloferax volcanii proteasomal genes with non-proteasomal gene neighbours including RNase P, MOSC domain and SAM-methyltransferase homologues
Microbiology 2007; 153(9): 3009-3022 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Weili Liang, Alberto Pascual-Montano, Anisia J. Silva, and Jorge A. Benitez

The cyclic AMP receptor protein modulates quorum sensing, motility and multiple genes that affect intestinal colonization in Vibrio cholerae
Microbiology 2007; 153(9): 2964-2975 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Gunnar N. Schroeder, Naja J. Jann, and Hubert Hilbi

Intracellular type III secretion by cytoplasmic Shigella flexneri promotes caspase-1-dependent macrophage cell death
Microbiology 2007; 153(9): 2862-2876 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Uma Shankar Sagaram, Brian D. Shaw, and Won-Bo Shim

Fusarium verticillioides GAP1, a gene encoding a putative glycolipid-anchored surface protein, participates in conidiation and cell wall structure but not virulence
Microbiology 2007; 153(9): 2850-2861 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Fernando Navarro-García, Adrián Canizalez-Roman, Jorge E. Vidal, and Ma. Isabel Salazar

Intoxication of epithelial cells by plasmid-encoded toxin requires clathrin-mediated endocytosis
Microbiology 2007; 153(9): 2828-2838 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Figure]

Tomoko Iwaki, Masayuki Onishi, Masaru Ikeuchi, Ayako Kita, Reiko Sugiura, Yuko Giga-Hama, Yasuhisa Fukui, and Kaoru Takegawa

Essential roles of class E Vps proteins for sorting into multivesicular bodies in Schizosaccharomyces pombe
Microbiology 2007; 153(8): 2753-2764 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Maria Lluch-Senar, Miquel Vallmitjana, Enrique Querol, and Jaume Piñol

A new promoterless reporter vector reveals antisense transcription in Mycoplasma genitalium
Microbiology 2007; 153(8): 2743-2752 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Thuy T. Pham, Deborah Jacobs-Sera, Marisa L. Pedulla, Roger W. Hendrix, and Graham F. Hatfull

Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria
Microbiology 2007; 153(8): 2711-2723 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Gil Shalom, Jonathan G. Shaw, and Mark S. Thomas

In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages
Microbiology 2007; 153(8): 2689-2699 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Nathan Jeffery, Robin B. Gasser, Penelope A. Steer, and Amir H. Noormohammadi

Classification of Mycoplasma synoviae strains using single-strand conformation polymorphism and high-resolution melting-curve analysis of the vlhA gene single-copy region
Microbiology 2007; 153(8): 2679-2688 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

R. H. Orsi, D. R. Ripoll, M. Yeung, K. K. Nightingale, and M. Wiedmann

Recombination and positive selection contribute to evolution of Listeria monocytogenes inlA
Microbiology 2007; 153(8): 2666-2678 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Tables]

Emma Griffiths and Radhey S. Gupta

Phylogeny and shared conserved inserts in proteins provide evidence that Verrucomicrobia are the closest known free-living relatives of chlamydiae
Microbiology 2007; 153(8): 2648-2654 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Takashi Yamada, Takeru Kawasaki, Shoko Nagata, Akiko Fujiwara, Shoji Usami, and Makoto Fujie

New bacteriophages that infect the phytopathogen Ralstonia solanacearum
Microbiology 2007; 153(8): 2630-2639 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Chao-Jen Shih and Mei-Chin Lai

Analysis of the AAA+ chaperone clpB gene and stress-response expression in the halophilic methanogenic archaeon Methanohalophilus portucalensis
Microbiology 2007; 153(8): 2572-2583 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Masayuki Inui, Masako Suda, Shohei Okino, Hiroshi Nonaka, László G. Puskás, Alain A. Vertès, and Hideaki Yukawa

Transcriptional profiling of Corynebacterium glutamicum metabolism during organic acid production under oxygen deprivation conditions
Microbiology 2007; 153(8): 2491-2504 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Flavie Pouillot, Corinne Fayolle, and Elisabeth Carniel

A putative DNA adenine methyltransferase is involved in Yersinia pseudotuberculosis pathogenicity
Microbiology 2007; 153(8): 2426-2434 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Sebastian F. Zenk, David Stabat, Julie L. Hodgkinson, Andreas K. J. Veenendaal, Steven Johnson, and Ariel J. Blocker

Identification of minor inner-membrane components of the Shigella type III secretion system ‘needle complex’
Microbiology 2007; 153(8): 2405-2415 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Silvia Vilches, Rocío Canals, Markus Wilhelms, Maria Teresa Saló, Yuriy A. Knirel, Evgeny Vinogradov, Susana Merino, and Juan M. Tomás

Mesophilic Aeromonas UDP-glucose pyrophosphorylase (GalU) mutants show two types of lipopolysaccharide structures and reduced virulence
Microbiology 2007; 153(8): 2393-2404 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Kathleen M. Yeater, Jyotsna Chandra, Georgina Cheng, Pranab K. Mukherjee, Xiaomin Zhao, Sandra L. Rodriguez-Zas, Kurt E. Kwast, Mahmoud A. Ghannoum, and Lois L. Hoyer

Temporal analysis of Candida albicans gene expression during biofilm development
Microbiology 2007; 153(8): 2373-2385 [Abstract] [Full Text]  

Article supplement(s): [Supplementary tables]

Stanislav Forman, Michal J. Nagiec, Jennifer Abney, Robert D. Perry, and Jacqueline D. Fetherston

Analysis of the aerobactin and ferric hydroxamate uptake systems of Yersinia pestis
Microbiology 2007; 153(7): 2332-2341 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Glen C. Ulett, Amanda N. Mabbett, Khe C. Fung, Richard I. Webb, and Mark A. Schembri

The role of F9 fimbriae of uropathogenic Escherichia coli in biofilm formation
Microbiology 2007; 153(7): 2321-2331 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Sean P. Riley, Tomasz Bykowski, Kelly Babb, Kate von Lackum, and Brian Stevenson

Genetic and physiological characterization of the Borrelia burgdorferi ORF BB0374-pfs-metK-luxS operon
Microbiology 2007; 153(7): 2304-2311 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Erlend Bore, Solveig Langsrud, Øyvind Langsrud, Tone Mari Rode, and Askild Holck

Acid-shock responses in Staphylococcus aureus investigated by global gene expression analysis
Microbiology 2007; 153(7): 2289-2303 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

P. Aaron Kirkland, Christopher J. Reuter, and Julie A. Maupin-Furlow

Effect of proteasome inhibitor clasto-lactacystin--lactone on the proteome of the haloarchaeon Haloferax volcanii
Microbiology 2007; 153(7): 2271-2280 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Patrick M. Lucas, Victor S. Blancato, Olivier Claisse, Christian Magni, Juke S. Lolkema, and Aline Lonvaud-Funel

Agmatine deiminase pathway genes in Lactobacillus brevis are linked to the tyrosine decarboxylation operon in a putative acid resistance locus
Microbiology 2007; 153(7): 2221-2230 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Evan Burkala, Jacqueline M. Reimers, Karen H. Schmidt, Nick Davis, Ping Wei, and Barbara E. Wright

Secondary structures as predictors of mutation potential in the lacZ gene of Escherichia coli
Microbiology 2007; 153(7): 2180-2189 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Figure]

William J. Kenyon, Kristy L. Nicholson, Bronislava Rezuchova, Dagmar Homerova, Francisco Garcia-del Portillo, B. Brett Finlay, Mark J. Pallen, Jan Kormanec, and Michael P. Spector

^s-Dependent carbon-starvation induction of pbpG (PBP 7) is required for the starvation-stress response in Salmonella enterica serovar Typhimurium
Microbiology 2007; 153(7): 2148-2158 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Xiu-Lan Chen, Bin-Bin Xie, Jing-Tao Lu, Hai-Lun He, and Yuzhong Zhang

A novel type of subtilase from the psychrotolerant bacterium Pseudoalteromonas sp. SM9913: catalytic and structural properties of deseasin MCP-01
Microbiology 2007; 153(7): 2116-2125 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Julian Ihssen, Elena Grasselli, Claudio Bassin, Patrice François, Jean-Claude Piffaretti, Wolfgang Köster, Jacques Schrenzel, and Thomas Egli

Comparative genomic hybridization and physiological characterization of environmental isolates indicate that significant (eco-)physiological properties are highly conserved in the species Escherichia coli
Microbiology 2007; 153(7): 2052-2066 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Material]

Birte Meyer and Jan Kuever

Phylogeny of the alpha and beta subunits of the dissimilatory adenosine-5'-phosphosulfate (APS) reductase from sulfate-reducing prokaryotes – origin and evolution of the dissimilatory sulfate-reduction pathway
Microbiology 2007; 153(7): 2026-2044 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Ying Zhang, Ian P. Adams, and Colin Ratledge

Malic enzyme: the controlling activity for lipid production? Overexpression of malic enzyme in Mucor circinelloides leads to a 2.5-fold increase in lipid accumulation
Microbiology 2007; 153(7): 2013-2025 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Marius Vital, Hans Peter Füchslin, Frederik Hammes, and Thomas Egli

Growth of Vibrio cholerae O1 Ogawa Eltor in freshwater
Microbiology 2007; 153(7): 1993-2001 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Rita V. M. Rio, Matthias Anderegg, and Joerg Graf

Characterization of a catalase gene from Aeromonas veronii, the digestive-tract symbiont of the medicinal leech
Microbiology 2007; 153(6): 1897-1906 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Kenji Arakawa, Susumu Mochizuki, Kohei Yamada, Takenori Noma, and Haruyasu Kinashi

-Butyrolactone autoregulator-receptor system involved in lankacidin and lankamycin production and morphological differentiation in Streptomyces rochei
Microbiology 2007; 153(6): 1817-1827 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Bradley L. Dubbels, Luis A. Sayavedra-Soto, and Daniel J. Arp

Butane monooxygenase of ‘Pseudomonas butanovora’: purification and biochemical characterization of a terminal-alkane hydroxylating diiron monooxygenase
Microbiology 2007; 153(6): 1808-1816 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Hans Wildschutte and Jeffrey G. Lawrence

Differential Salmonella survival against communities of intestinal amoebae
Microbiology 2007; 153(6): 1781-1789 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figure]

Luis F. Larrondo, Paulo Canessa, Francisco Melo, Rubén Polanco, and Rafael Vicuña

Cloning and characterization of the genes encoding the high-affinity iron-uptake protein complex Fet3/Ftr1 in the basidiomycete Phanerochaete chrysosporium
Microbiology 2007; 153(6): 1772-1780 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Michael L. Kotewicz, Scott A. Jackson, J. Eugene LeClerc, and Thomas A. Cebula

Optical maps distinguish individual strains of Escherichia coli O157 : H7
Microbiology 2007; 153(6): 1720-1733 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

M. T. Hedayati, A. C. Pasqualotto, P. A. Warn, P. Bowyer, and D. W. Denning

Aspergillus flavus: human pathogen, allergen and mycotoxin producer
Microbiology 2007; 153(6): 1677-1692 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Jorik Arts, Arjan de Groot, Geneviève Ball, Eric Durand, Mohammed El Khattabi, Alain Filloux, Jan Tommassen, and Margot Koster

Interaction domains in the Pseudomonas aeruginosa type II secretory apparatus component XcpS (GspF)
Microbiology 2007; 153(5): 1582-1592 [Abstract] [Full Text]  

Article supplement(s): [Supplementary table]

Guokui Qin, Lizhi Zhu, Xiulan Chen, Peng George Wang, and Yuzhong Zhang

Structural characterization and ecological roles of a novel exopolysaccharide from the deep-sea psychrotolerant bacterium Pseudoalteromonas sp. SM9913
Microbiology 2007; 153(5): 1566-1572 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

M. Labbate, Y. Boucher, M. J. Joss, C. A. Michael, M. R. Gillings, and H. W. Stokes

Use of chromosomal integron arrays as a phylogenetic typing system for Vibrio cholerae pandemic strains
Microbiology 2007; 153(5): 1488-1498 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Joanna Bacon, Lynn G. Dover, Kim A. Hatch, Yi Zhang, Jessica M. Gomes, Sharon Kendall, Lorenz Wernisch, Neil G. Stoker, Philip D. Butcher, Gurdyal S. Besra, and Philip D. Marsh

Lipid composition and transcriptional response of Mycobacterium tuberculosis grown under iron-limitation in continuous culture: identification of a novel wax ester
Microbiology 2007; 153(5): 1435-1444 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Manuel Wolpert, Bertolt Gust, Bernd Kammerer, and Lutz Heide

Effects of deletions of mbtH-like genes on clorobiocin biosynthesis in Streptomyces coelicolor
Microbiology 2007; 153(5): 1413-1423 [Abstract] [Full Text]  

Article supplement(s): [Supplemenatry Table]

Sylvie Lautru, Daniel Oves-Costales, Jean-Luc Pernodet, and Gregory L. Challis

MbtH-like protein-mediated cross-talk between non-ribosomal peptide antibiotic and siderophore biosynthetic pathways in Streptomyces coelicolor M145
Microbiology 2007; 153(5): 1405-1412 [Abstract] [Full Text]  

Article supplement(s): [Supplemenatry Table]

Nai-Hua Hsiao, Johannes Söding, Dirk Linke, Corinna Lange, Christian Hertweck, Wolfgang Wohlleben, and Eriko Takano

ScbA from Streptomyces coelicolor A3(2) has homology to fatty acid synthases and is able to synthesize -butyrolactones
Microbiology 2007; 153(5): 1394-1404 [Abstract] [Full Text]  

Article supplement(s): [Supplementary data]

Ave Tooming-Klunderud, Thomas Rohrlack, Kamran Shalchian-Tabrizi, Tom Kristensen, and Kjetill S. Jakobsen

Structural analysis of a non-ribosomal halogenated cyclic peptide and its putative operon from Microcystis: implications for evolution of cyanopeptolins
Microbiology 2007; 153(5): 1382-1393 [Abstract] [Full Text]  

Article supplement(s): [Supplementary figures]

Peter Ø. Jensen, Thomas Bjarnsholt, Richard Phipps, Thomas B. Rasmussen, Henrik Calum, Lars Christoffersen, Claus Moser, Paul Williams, Tacjana Pressler, Michael Givskov, and Niels Høiby

Rapid necrotic killing of polymorphonuclear leukocytes is caused by quorum-sensing-controlled production of rhamnolipid by Pseudomonas aeruginosa
Microbiology 2007; 153(5): 1329-1338 [Abstract] [Full Text]  

Article supplement(s): [Supplementary Movie]

Moshe Shemesh, Avshalom Tam, and Doron Steinberg

Differential gene expression profiling of Streptococcus mutans cultured under biofilm and planktonic conditions
Microbiology 2007; 153(5): 1307-1317 [Abstract] [Full Text]  

Article supplement(s):